BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E01LP1|AL430232
(941 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1626 627 e-179
3x_Contig708 217 3e-56
>3x_Contig1626
Length = 17698
Score = 627 bits (309), Expect = e-179
Identities = 324/327 (99%), Gaps = 2/327 (0%)
Strand = Plus / Plus
Query: 616 agtaatccctgatagttcctgcgaaaagatcccagactttatcgttatcttgataacttg 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agtaatccctgatagttcctgcgaaaagatcccagactttatcgttatcttgataacttg 60
Query: 676 gagatcttggagaaggatctttgtaggtgtacattttcaagttcaaagtacccacattct 735
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 gagatcttggagaaggatctttgtaggtgtac-ttttcaagttcaaagtacccacattct 119
Query: 736 gaggatcggaataaatgacccgatcaccgtcaatggtcaagttgtatccatggttttgag 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gaggatcggaataaatgacccgatcaccgtcaatggtcaagttgtatccatggttttgag 179
Query: 796 caattttattggtaatgccagcagttctttccaacacctcttttgcgtttgagtgcatgc 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 caattttattggtaatgccagcagttctttccaacacctcttttgcgtttgagtgcatgc 239
Query: 856 caatacggtagttgatctccagagaaccagtttctggtagtgca-ttaccttgacacctg 914
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 240 caatacggtagttgatctccagagaaccagtttctggtagtgcatttaccttgacacctg 299
Query: 915 aatggracatgtcaatagactcggtgg 941
||||| |||||||||||||||||||||
Sbjct: 300 aatggaacatgtcaatagactcggtgg 326
>3x_Contig708
Length = 1983
Score = 217 bits (107), Expect = 3e-56
Identities = 147/169 (86%)
Strand = Plus / Plus
Query: 1 aatttatctcccacccagaagttctgccctctgatacaacaggaaaacaaaggttacccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1304 aatttatctcccacccagaagttctgccctctgatacaacaggaaaacaaaggttacccc 1363
Query: 61 ctcnanctaggcngnatttcacaggnagnnctacncttccaagcwtaaawwcwcwatgca 120
||| | |||||| | |||||||||| || |||| ||||||||| || | | | ||||
Sbjct: 1364 ctctatctaggctgtatttcacaggtagttctactcttccaagcttatattctctatgct 1423
Query: 121 ttgacaggwtttgtttgattgttgaaaaraaaaaaaamaaamaaaaaaa 169
|||||||| ||||||||||||||||||| |||||| ||| || ||||
Sbjct: 1424 ttgacaggttttgtttgattgttgaaaagtaaaaaatcaaacaagaaaa 1472
Score = 205 bits (101), Expect = 1e-52
Identities = 282/337 (83%), Gaps = 8/337 (2%)
Strand = Plus / Plus
Query: 305 aaggaaagtaagwtcatgtttawawtgwttgttatwtaawwwctacagtaaaaagaaacc 364
||||| ||| || ||||||||| | || ||||||| ||| ||||||| | |||||||
Sbjct: 1608 aaggatagttagttcatgtttatattgtttgttatttaatttctacagttattagaaacc 1667
Query: 365 aacaacagcaccaacagcaaaaagaacaaactggtagaaaaagcctgcaagtagaaggac 424
|||| |||||||| ||||| || ||| ||||||||| ||||||||||||| | |||||
Sbjct: 1668 aacatcagcaccatcagcatttagtacatactggtagataaagcctgcaagttgtaggac 1727
Query: 425 attagcaacaggtgagtgtacaaacacggaaagaacaaagacgaacaaatcaaaagggaa 484
||||||||| ||||||| | || |||| | | || | ||||||| |||| ||||||
Sbjct: 1728 attagcaactggtgagtcttatttcaaggaatgcaaaatgtcgaacaattcaatagggaa 1787
Query: 485 aaacgcacctaggaaactatagatatgagaagtcagattccatagatgtctagtatcagt 544
| ||||||| |||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1788 tatcgcacctgggaatctatagatatgagagg-cagattccatagatgtctagtatcagt 1846
Query: 545 gtttgcagtcatggtgcctgtagtaatgaataacttggatggctcatcttttgataacac 604
| ||||||| |||||| |||||||||||||||| |||||||| ||||||||| | ||||
Sbjct: 1847 g-ttgcagtaatggtg-ctgtagtaatgaataa-atggatggc-catcttttg-ttacac 1901
Query: 605 acgattttcaaagtaatccctgatagttcctgcgaaa 641
||| |||||||||| |||||||||| |||||||||||
Sbjct: 1902 acggttttcaaagt-atccctgata-ttcctgcgaaa 1936
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,553
Number of Sequences: 1807
Number of extensions: 16553
Number of successful extensions: 2063
Number of sequences better than 1.0e-20: 2
length of query: 941
length of database: 10,358,551
effective HSP length: 16
effective length of query: 925
effective length of database: 10,329,639
effective search space: 9554916075
effective search space used: 9554916075
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (99.9 bits)